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Table 1 Classification and general features of M. tuberculosis K according to the MIGS recommendation [16]

From: Complete genome sequence of Mycobacterium tuberculosis K from a Korean high school outbreak, belonging to the Beijing family

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [26]

  

Phylum Actinobacteria

TAS [27]

  

Class Actinobacteria

TAS [28]

  

Order Actinomycetales

TAS [2831]

  

Family Mycobacteriaceae

TAS [2830, 32]

  

Genus Mycobacterium

TAS [30, 33, 34]

  

Species Mycobacterium tuberculosis

TAS [35]

  

Strain K (CP007803.1)

 
 

Gram stain

Weakly positive

TAS [35]

 

Cell shape

Irregular rods

TAS [35]

 

Motility

Non motile

TAS [35]

 

Sporulation

Nonsporulating

NAS

 

Temperature range

Mesophile

TAS [35]

 

Optimum temperature

37 °C

TAS [35]

 

pH range; Optimum

5.5–8; 7

IDA

 

Carbon source

Asparagine, Oleic acid, Potato starch

TAS [14, 35]

MIGS-6

Habitat

Human-associated: Human lung

TAS [35]

MIGS-6.3

Salinity

Normal

TAS [35]

MIGS-22

Oxygen

Aerobic

TAS [35]

MIGS-15

Biotic relationship

Free-living

NAS

MIGS-14

Pathogenicity

Hypervirulent

TAS [14, 35]

 

Biosafety level

3

NAS

 

Isolation

Sputum of TB patient

TAS [35]

MIGS-4

Geographic location

High schools in Kyunggi Province, Republic of Korea.

TAS [35]

MIGS-5

Sample collection time

1999

TAS [35]

MIGS-4.1

Latitude Longitude

37.274377

NAS

MIGS-4.2

Longitude

127.009442

NAS

MIGS-4.4

Altitude

Not reported

NAS

  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [36]