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Table 4 Number of genes associated with general COG functional categories

From: The complete genome, structural proteome, comparative genomics and phylogenetic analysis of a broad host lytic bacteriophage ϕD3 infecting pectinolytic Dickeya spp.

Code Value % age Description
J 0 0.00 Translation, ribosomal structure and biogenesis
A 1 0.53 RNA processing and modification
K 4 2.11 Transcription
L 9 4.74 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 6 3.16 Cell cycle control, Cell division, chromosome partitioning
V 0 0.00 Defense mechanisms
T 0 0.00 Signal transduction mechanisms
M 0 0.00 Cell wall/membrane biogenesis
N 0 0.00 Cell motility
U 0 0.00 Intracellular trafficking and secretion
O 0 0.00 Posttranslational modification, protein turnover, chaperones
C 1 0.53 Energy production and conversion
G 0 0.00 Carbohydrate transport and metabolism
E 0 0.00 Amino acid transport and metabolism
F 2 1.05 Nucleotide transport and metabolism
H 0 0.00 Coenzyme transport and metabolism
I 0 0.00 Lipid transport and metabolism
P 0 0.00 Inorganic ion transport and metabolism
Q 0 0.00 Secondary metabolites biosynthesis, transport and catabolism
R 41 21.6 General function prediction only
S 10 5.3 Function unknown
- 139 60.98 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome