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Table 1 Classification and general features of Dickeya spp. bacteriophage ϕD3

From: The complete genome, structural proteome, comparative genomics and phylogenetic analysis of a broad host lytic bacteriophage ϕD3 infecting pectinolytic Dickeya spp.

MIGS ID Property Term Evidence codea
  Classification Domain: Viruses, dsDNA viruses, no RNA viruses TAS [5]
   Phylum: unassigned TAS [5]
   Class: unassigned TAS [5]
   Order: Caudovirales TAS [5]
   Family: Myoviridae TAS [5]
   Genus: unassigned TAS [5]
   Species: unassigned TAS [5]
  Gram stain Not applicable TAS [5]
  Particle shape Icosahedral IDA
  Motility Not applicable TAS [5]
  Sporulation Not applicable TAS [5]
  Temperature range Not applicable TAS [5]
  Optimum temperature Not applicable TAS [5]
  pH range; Optimum Not applicable TAS [5]
  Carbon source Not applicable TAS [5]
MIGS-6 Habitat Soil IDA
MIGS-6.3 Salinity Not applicable TAS [5]
MIGS-22 Oxygen requirement Not applicable TAS [5]
MIGS-15 Biotic relationship Obligate intracellular parasite of Dickeya spp. IDA
MIGS-14 Pathogenicity Lytic virus of Dickeya spp. IDA
MIGS-4 Geographic location Poland / Kujawsko-Pomorskie (Kuyavian-Pomeranian Province) IDA
MIGS-5 Sample collection February 18, 2013 IDA
MIGS-4.1 Latitude 53.68 N IDA
MIGS-4.2 Longitude 18.09 E IDA
MIGS-4.3 Depth 20 cm IDA
MIGS-4.4 Altitude 118 m IDA
  1. aEvidence codes - IDA inferred from direct assay, TAS traceable author statement (i.e., a direct report exists in the literature), NAS non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [20]