Skip to main content

Table 4 Nucleotide content and gene count levels of the genome

From: High quality draft genomes of the Mycoplasma mycoides subsp. mycoides challenge strains Afadé and B237

Strain Afadé B237
Attribute Value % of totala Value % of totala
Genome Size (bp) 1,190,241 100.00 1,203,804 100.00
DNA coding (bp) 1,032,189 86.70 1,043,698 86.70
DNA G + C (bp) 284,536 23.90 287,709 23.90
DNA scaffolds na na na na
Total genes 1156 100.00 1157 100.00
Protein-coding genes 1120 96.89 1121 96.89
rRNA genes 6 5.19 6 5.19
Pseudogenes 0 0 0 0
Genes in internal clusters na na na na
Genes with function prediction 687 59.43 693 59.90
Genes assigned to COGs 681 58.71 693 59.9
Genes with Pfam domains 389 33.65 355 30.68
Genes with signal peptides 74 6.40 74 6.40
Genes with transmembrane helices 234 20.24 241 20.83
CRISPR repeats 0.00 0.00 0.00 0.00
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome