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Table 4 Nucleotide content and gene count levels of the genome

From: High quality draft genomes of the Mycoplasma mycoides subsp. mycoides challenge strains Afadé and B237

Strain

Afadé

B237

Attribute

Value

% of totala

Value

% of totala

Genome Size (bp)

1,190,241

100.00

1,203,804

100.00

DNA coding (bp)

1,032,189

86.70

1,043,698

86.70

DNA G + C (bp)

284,536

23.90

287,709

23.90

DNA scaffolds

na

na

na

na

Total genes

1156

100.00

1157

100.00

Protein-coding genes

1120

96.89

1121

96.89

rRNA genes

6

5.19

6

5.19

Pseudogenes

0

0

0

0

Genes in internal clusters

na

na

na

na

Genes with function prediction

687

59.43

693

59.90

Genes assigned to COGs

681

58.71

693

59.9

Genes with Pfam domains

389

33.65

355

30.68

Genes with signal peptides

74

6.40

74

6.40

Genes with transmembrane helices

234

20.24

241

20.83

CRISPR repeats

0.00

0.00

0.00

0.00

  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome