Skip to main content

Table 3 Genome statistics

From: Genome sequence of Anoxybacillus ayderensis AB04T isolated from the Ayder hot spring in Turkey

Attribute

Value

% of Totala

Genome size (bp)

2,832,347

100.00

DNA coding (bp)

2,517,744

88.89

DNA G + C (bp)

 

41.83

DNA scaffolds

74

100.00

Total genes

2,998

100.00

Protein coding genes

2,895

96.56

RNA genes

103

3.44

Pseudo genes

not determined

not determined

Genes in internal clusters

not determined

not determined

Genes with function prediction

1,637

54.60

Genes assigned to COGs

2,349

78.35

Genes with Pfam domains

2,158

71.98

Genes with signal peptides

103

3.44

Genes with transmembrane helices

674

23.28

Number of CRISPR candidates

3

 

Confirmed CRISPR(s)

1

 

Unconfirmed CRISPR(s)

2

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome