Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,359,755 | 100.00 |
DNA coding (bp) | 2,156,275 | 91.38 |
DNA G + C (bp) | 961,311 | 40.74 |
DNA scaffolds | 12 | 100.00 |
Total genes | 2,248 | 100.00 |
Protein coding genes | 2,184 | 97.15 |
RNA genes | 64 | 2.85 |
Pseudo genes | 75 | 3.34 |
Genes in internal clusters | 228 | 10.14 |
Genes with function prediction | 1,823 | 81.09 |
Genes assigned to COGs | 1,512 | 67.26 |
Genes with Pfam domains | 1,842 | 81.94 |
Genes with signal peptides | 44 | 1.96 |
Genes with transmembrane helices | 658 | 29.27 |
CRISPR repeats | 2 | 0.09 |