Table 9 Functional information: Composition of functional categories (COG)
COG Category | JREM1 Riffles_WGS |
|---|---|
(% of reads) | |
RNA processing and modification | 0 |
Chromatin structure and dynamics | 0 |
Energy production and conversion | 10 |
Cell cycle control and mitosis | 1 |
Amino acid metabolism and transport | 11 |
Nucleotide metabolism and transport | 4 |
Carbohydrate metabolism and transport | 5 |
Coenzyme metabolism | 4 |
Lipid metabolism | 5 |
Translation | 9 |
Transcription | 4 |
Replication and repair | 6 |
Cell wall/membrane/envelope biogenesis | 6 |
Cell motility | 0 |
Post-translational modification, protein turnover, chaperone functions | 4 |
Inorganic ion transport and metabolism | 4 |
Secondary structure | 2 |
General functional prediction only | 12 |
Function unknown | 5 |
Signal transduction | 3 |
Intracellular trafficking and secretion | 2 |
Nuclear structure | 0 |
Cytoskeleton | 0 |
Defense mechanisms | 2 |