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Table 4 Sequence processing

From: Metagenomic analysis of planktonic microbial consortia from a non-tidal urban-impacted segment of James River

Label

Riffles_WGS

Riffles_16S

Tool(s) used for quality control

MG-RAST

BaseSpace

Number of sequences removed by QC

0.61 × 106

0.18 × 106

Number of sequences that passed QC

3.45 × 106

3.93 × 106

Number of artificial duplicate reads

0.13 × 106

NA