Table 3 Library information
Label | Riffles_WGS | Riffles_16S |
|---|---|---|
Sample label | Mayo South | Mayo South |
Sample preparation method | Mobio Sterivexâ„¢ PowerWaterâ„¢ DNA Kit | Mobio Sterivexâ„¢ PowerWaterâ„¢ DNA Kit* |
Library preparation | Ion Plus Fragment Library kit | 16S fusion PCR [14] |
Sequencing platform(s) | Ion Torrent PGM | Illumina MiSeq |
Sequencing chemistry | PGM Sequencing 200 Kit (318 chip) | MiSeq Reagent Kit Version 3 (600Â cycles PE) |
Sequence size (GBp) | 0.61 | 1.15 |
Number of reads | 4.07 × 106 | 4.11 × 106 |
Mate pairs or paired ends | NA | empty |
Sequencing library insert size | 150–250 | 300 |
Average read length | 133 | 292 |
Standard deviation for read length | 43 | 0 |