Table 4 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,373,835 | 100.0 |
DNA coding (bp) | 3,762,570 | 86.0 |
DNA G + C (bp) | 1,940,626 | 44.4 |
DNA scaffolds | 3 | |
Total genes | 3,912 | 100.0 |
Protein coding genes | 3,783 | 96.7 |
RNA genes | 129 | 3.3 |
Pseudo genes | 55 | 1.4 |
Genes in internal clusters | 447 | 11.4 |
Genes with function prediction | 3,317 | 84.8 |
Genes assigned to COGs | 2,620 | 66.9 |
Genes with Pfam domains | 3,317 | 84.8 |
Genes with signal peptides | 592 | 15.1 |
Genes with transmembrane helices | 1,037 | 26.5 |
CRISPR repeats | 0 | 0.0 |