Table 2 Project information
MIGS ID | Property | Term |
|---|---|---|
MIGS 31 | Finishing quality | Completed |
MIGS-28 | Libraries used | 400-600-bp fragments (454), >10-kb fragments (PacBio) |
MIGS 29 | Sequencing platforms | Roche 454 Life Sciences |
Pacific Biotechnologies PacBio | ||
MIGS 31.2 | Fold coverage | 60 × |
MIGS 30 | Assemblers | Staden-gap4, Newbler (Roche/454 GS FLX), SMRTanalysis, version 2.0.1, HGAP module (Celera and Quiver) |
MIGS 32 | Gene calling method | Glimmer3, tRNAscan-SE 1.21, Rfam, RNAmmer |
Locus Tags | VANGcI, VANGcII, VANGp67 | |
Genbank ID | GCA000786425 | |
GenBank Date of Release | September 1, 2014 | |
GOLD ID | Gp0102007 | |
BIOPROJECT | PRJEB5701 | |
MIGS 13 | Source Material Identifier | NB10 |
Project relevance | Aquaculture, fish pathogen |