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Table 1 Classification and general features of ‘Treponema phagdenis’ strain V1 [33]

From: Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [34]

  

Phylum Spirochaetes

TAS [35]

  

Class ‘Spirochaetia’

TAS [36]

  

Order Spirochaetales

TAS [3739]

  

Family Spirochaetaceae

TAS [40]

  

Genus Treponema

TAS [6, 14]

  

Species ‘Treponema phagdenis’

TAS [5, 14]

  

Strain: V1

 
 

Gram stain

negative

TAS [41]

 

Cell shape

Helical

TAS [41]

 

Motility

Motile

TAS [14, 17]

 

Sporulation

Non-sporulating

NAS

 

Temperature range

30-42 °C

NAS [41]

 

Optimum temperature

37 °C

NAS [41]

 

pH range; Optimum

6–8.5; 7

TAS [5]

 

Carbon source

D-glucose

IDA

MIGS-6

Habitat

Digital dermatitis lesion in cattle

TAS [14]

MIGS-6.3

Salinity

Not reported

 

MIGS-22

Oxygen requirement

Anaerobic

NAS

MIGS-15

Biotic relationship

Host-associated

NAS

MIGS-14

Pathogenicity

Potential pathogen in cattle

TAS [14]

MIGS-4

Geographic location

Västra Götaland county, Sweden

TAS [14]

MIGS-5

Sample collection

2005

TAS [14]

MIGS-4.1

Latitude

Not reported

 

MIGS-4.2

Longitude

Not reported

 

MIGS-4.4

Altitude

Not reported

 
  1. IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [33]
  2. aEvidence codes