Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 164 | 6.76 | Translation, ribosomal structure, and biogenesis |
A | 1 | 0.04 | RNA processing and modification |
K | 100 | 4.12 | Transcription |
L | 102 | 4.20 | Replication, recombination, and repair |
B | 3 | 0.12 | Chromatin structure and dynamics |
D | 20 | 0.82 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 37 | 1.53 | Defense mechanisms |
T | 55 | 2.27 | Signal transduction mechanisms |
M | 79 | 3.26 | Cell wall/membrane biogenesis |
N | 28 | 1.15 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 28 | 1.15 | Intracellular trafficking and secretion, and vesicular transport |
O | 88 | 3.63 | Post-translational modification, protein turnover, chaperones |
C | 162 | 6.68 | Energy production and conversion |
G | 121 | 4.99 | Carbohydrate transport and metabolism |
E | 299 | 12.32 | Amino acid transport and metabolism |
F | 76 | 3.13 | Nucleotide transport and metabolism |
H | 109 | 4.49 | Coenzyme transport and metabolism |
I | 80 | 3.30 | Lipid transport and metabolism |
P | 173 | 7.13 | Inorganic ion transport and metabolism |
Q | 46 | 1.90 | Secondary metabolism biosynthesis, transport, and catabolism |
R | 392 | 16.16 | General function prediction only |
S | 263 | 10.84 | Function unknown |
- | 1961 | 47.26 | Not in COGs |