Table 4 Number of genes associated with the general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 172 | 6.2 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 167 | 6.0 | Transcription |
L | 127 | 4.5 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 30 | 1.1 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 28 | 1.0 | Defense mechanisms |
T | 103 | 3.7 | Signal transduction mechanisms |
M | 179 | 6.4 | Cell wall/membrane/envelope biogenesis |
N | 43 | 1.5 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 49 | 1.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 112 | 4.0 | Posttranslational modification, protein turnover, chaperones |
C | 178 | 6.4 | Energy production and conversion |
G | 185 | 6.6 | Carbohydrate transport and metabolism |
E | 273 | 9.8 | Amino acid transport and metabolism |
F | 75 | 2.7 | Nucleotide transport and metabolism |
H | 125 | 4.5 | Coenzyme transport and metabolism |
I | 108 | 3.9 | Lipid transport and metabolism |
P | 141 | 5.0 | Inorganic ion transport and metabolism |
Q | 77 | 2.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 339 | 12.1 | General function prediction only |
S | 282 | 10.1 | Function unknown |
- | 595 | 18.8 | Not in COGs |