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Table 3 Genome statisticsa

From: Genome sequence of the pink–pigmented marine bacterium Loktanella hongkongensis type strain (UST950701–009PT), a representative of the Roseobacter group

Attribute

Value

% of Total

Genome size (bp)

3,198,444

100.00

DNA coding region (bp)

2,899,639

90.66

DNA scaffolds

9

 

Extrachromosomal elements

2

 

Total genes

3161

100.00

RNA genes

57

1.80

rRNA operons

2

 

tRNA genes

44

1.39

Protein-coding genes

3104

98.20

Genes with function prediction (proteins)

2652

83.90

Genes in paralog clusters

2546

80.54

Genes assigned to COGs

2566

81.18

Genes assigned Pfam domains

2697

85,32

Genes with signal peptides

291

9.21

Genes with transmembrane helices

704

22.27

CRISPR repeats

0

 
  1. aThe annotation shown in IMG [32] is subject to regular updates; the numbers presented here might deviate from later versions of the genome