Table 4 Number of genes associated with the general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 152 | 5.4 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.1 | RNA processing and modification |
K | 209 | 7.4 | Transcription |
L | 138 | 4.9 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 21 | 0.8 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 49 | 1.7 | Defense mechanisms |
T | 177 | 6.3 | Signal transduction mechanisms |
M | 237 | 8.4 | Cell wall/membrane/envelope biogenesis |
N | 10 | 0.4 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 50 | 1.8 | Intracellular trafficking, secretion, and vesicular transport |
O | 111 | 3.9 | Posttranslational modification, protein turnover, chaperones |
C | 152 | 5.4 | Energy production and conversion |
G | 201 | 7.2 | Carbohydrate transport and metabolism |
E | 199 | 7.1 | Amino acid transport and metabolism |
F | 67 | 2.4 | Nucleotide transport and metabolism |
H | 124 | 4.4 | Coenzyme transport and metabolism |
I | 109 | 3.9 | Lipid transport and metabolism |
P | 133 | 4.7 | Inorganic ion transport and metabolism |
Q | 48 | 1.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 360 | 12.8 | General function prediction only |
S | 261 | 9.3 | Function unknown |
- | 1486 | 36.6 | Not in COGs |