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Table 1 Classification and general features of F. rivuli WB 3.3-2T in accordance with the MIGS recommendations [26], as developed by [25], List of Prokaryotic names with Standing in Nomenclature [23] and the Names for Life database [31]

From: High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [73]

 

Phylum Bacteroidetes

TAS [2, 41]

 

Class Flavobacteriia

TAS [3, 11]

 

Order Flavobacteriales

TAS [14, 65]

 

Family Flavobacteriaceae

TAS [13, 65]

 

Genus Flavobacterium

TAS [12, 36]

 

Species Flavobacterium rivuli

TAS [1]

 

type strain WB 3.3-2T

TAS [1]

 

Gram-stain

negative

TAS [1]

 

Cell shape

rod-shaped

TAS [1]

 

Motility

nonmotile

TAS [1]

 

Sporulation

non-spore forming

TAS [13]

 

Temperature range

mesophilic (4–29 °C)

TAS [1]

 

Optimum temperature

16–24 °C

TAS [1]

 

pH range; Optimum

6.4–7.8, 7

TAS [1]

 

Carbon source

Carbohydrates, peptides

TAS [1]

MIGS-6

Habitat

fresh water

TAS [1, 17]

MIGS-6.3

Salinity

0–2 %

TAS [1]

MIGS-22

Oxygen requirement

obligate aerobe

TAS [1]

MIGS-15

Biotic relationship

free-living

TAS [1, 17]

MIGS-14

Pathogenicity

not reported

NAS

MIGS-4

Geographic location

Harz Mountains, North Germany

TAS [1, 17]

MIGS-5

Sample collection time

9 June 2005

TAS [1, 17]

MIGS-4.1

Latitude

51.758065

TAS [1, 17]

MIGS-4.2

Longitude

10.11638

TAS [1, 17]

MIGS-4.4

Altitude

273 m

TAS [17]

  1. Evidence codes - IDA, Inferred from Direct Assay (first time in publication), TAS traceable author statement (i.e., a direct report exists in the literature), NAS, non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [5]