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Table 2 Genomes statistics

From: High-quality draft genome sequences of five anaerobic oral bacteria and description of Peptoanaerobacter stomatis gen. nov., sp. nov., a new member of the family Peptostreptococcaceae

Attribute

strain ACC19a

strain CM2

strain CM5

strain OBRC8

strain AS15

Value

%a

Value

%a

Value

%a

Value

%a

Value

%a

Genome size (bp)

254, 1543

100

231, 259, 2

100

259, 424, 2

100

255, 327, 6

100

265, 463, 8

100

DNA coding region (bp)

215, 2064

85

196, 164, 0

85

219, 838, 6

85

217, 178, 3

85

220, 441, 4

83

DNA G + C (bp)

771, 857

30

695, 842

30

790, 067

30

783, 396

31

855, 775

32

DNA scaffolds

59

100

19

100

106

100

40

100

52

100

Total genes

2, 331

100

2, 030

100

2, 379

100

2, 313

100

2, 336

100

Protein coding genes

2, 277

98

1, 973

97

2, 325

98

2, 277

98

2, 308

99

RNA genes

54

2

57

3

54

2

36

2

28

1

Pseudo genes

0

0

0

0

0

0

0

0

0

0

Genes in internal clusters

21

1

4

0

18

1

4

0

10

0

Genes with function prediction

1, 811

78

1, 618

80

1, 873

79

1, 868

81

1, 915

82

Genes assigned to COGs

1, 404

60

1, 362

67

1, 448

61

1, 422

61

1, 472

63

Genes with Pfam domains

1, 856

80

1, 636

81

1, 917

81

1, 822

79

1, 851

79

Genes with signal peptides

129

6

120

6

130

6

131

6

174

7

Genes with transmembrane helices

531

23

455

22

505

21

514

22

616

26

CRISPR repeats

0

0

0

0

0

0

0

0

0

0

  1. a% - Percent of total. The total is based on either the size of the genome in base pairs or the protein coding genes in the annotated genome