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Table 3 Nucleotide content and gene count levels of the genome

From: Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9T

Attribute

Genome (total)

 

Value

% of totala

Genome size (bp)

3,439,591

100

DNA coding (bp)

2,662,806

77.41

DNA G + C (bp)

2,298,404

66.82

Total genesb

2856

 

RNA genes

56

 

Pseudo genes

19

 

Protein-coding genes

2781

100

Genes in internal clusters

1156

41.57

Genes with function prediction

2061

74.11

Genes assigned to COGs

2196

78.99

Genes with Pfam domains

2495

89.74

Genes with signal peptides

717

25.79

Genes with transmembrane helices

588

21.15

CRISPR repeats

3

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
  2. bAlso includes 19 pseudogenes, 10 RNA genes, 45 rRNAs and 1 ncRNA