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Table 3 Nucleotide content and gene count levels of the genome

From: Non contiguous-finished genome sequence and description of Bacillus jeddahensis sp. nov.

Attribute

Genome (total)

 

Value

% of totala

Size (bp)

4,762,944

100

G + C content (bp)

1,876,599

39.42

Coding region (bp)

4,065,588

85.36

DNA scaffolds

ND

 

Total genes

4,741

100

RNA genes

98

2.07

Protein-coding genes

4,654

97.72

Pseudo genes

ND

 

Genes in internal clusters

ND

 

Genes with function prediction

3,410

71.92

Genes assigned to COGs

2,902

61.21

Genes with Pfam domains

ND

 

Genes with peptide signals

93

1.96

Genes with transmembrane helices

1,301

27.44

CRISPR repeats

ND

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome. ND not determined