Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 145 | 5.71 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.08 | RNA processing and modification |
K | 190 | 7.49 | Transcription |
L | 111 | 4.37 | Replication, recombination and repair |
B | 0 | 0 | Chromatin structure and dynamics |
D | 25 | 0.99 | Cell cycle control, Cell division, chromosome partitioning |
V | 42 | 1.65 | Defense mechanisms |
T | 176 | 6.93 | Signal transduction mechanisms |
M | 142 | 5.59 | Cell wall/membrane biogenesis |
N | 104 | 4.10 | Cell motility |
U | 92 | 3.62 | Intracellular trafficking and secretion |
O | 130 | 5.12 | Posttranslational modification, protein turnover, chaperones |
C | 176 | 6.93 | Energy production and conversion |
G | 85 | 3.35 | Carbohydrate transport and metabolism |
E | 182 | 7.17 | Amino acid transport and metabolism |
F | 60 | 2.36 | Nucleotide transport and metabolism |
H | 129 | 5.08 | Coenzyme transport and metabolism |
I | 90 | 3.55 | Lipid transport and metabolism |
P | 136 | 5.36 | Inorganic ion transport and metabolism |
Q | 43 | 1.69 | Secondary metabolites biosynthesis, transport and catabolism |
R | 237 | 9.34 | General function prediction only |
S | 241 | 9.50 | Function unknown |
- | 3517 | 60.72 | Not in COGs |