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Table 1 Classification and general features of S. algae C6G3 [17]

From: Draft-genome sequence of Shewanella algae strain C6G3

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [4547]

  

Phylum Proteobacteria

TAS [48]

  

Class Gammaproteobacteria

TAS [49, 50]

  

Order Alteromonadales

TAS [51]

  

Family Shewanellaceae

TAS [52]

  

Genus Shewanella

TAS [53, 54]

  

Species Shewanella algae

TAS [2]

  

(Type) strain: C6G3

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Straights rods

IDA

 

Motility

Motile

IDA

 

Sporulation

Nonsporulating

NAS

 

Temperature range

10–40 °C (die at 45 °C)

IDA

 

Optimum temperature

30 °C

IDA

 

pH range; Optimum

6–9; 8

IDA

 

Carbon source

Disaccharides, some organic acids, amino acids

IDA

MIGS-6

Habitat

Muddy interdidal sediments

IDA

MIGS-6.3

Salinity

0-10 % NaCl (w/v); 10 % NaCl (w/v)

IDA

MIGS-22

Oxygen requirement

Facultative anaerobic

IDA

MIGS-15

Biotic relationship

Free-living

IDA

MIGS-14

Pathogenicity

Biosafety level 1 for ATCC 51192

TAS [2]

MIGS-4

Geographic location

Arcachon Bay, Aquitaine, France

IDA

MIGS-5

Sample collection

October, 2007

IDA

MIGS-4.1

Latitude

N44° 40’

IDA

MIGS-4.2

Longitude

W1° 10’

IDA

MIGS-4.3

Depth

Top 10 cm of sediment

IDA

MIGS-4.4

Altitude

Sea level

IDA

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [55]. You will find the table of associated MIGS Record in additional file (Additional file 2)