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Table 3 Genome statistics

From: Genome sequence of Clostridium sporogenes DSM 795T, an amino acid-degrading, nontoxic surrogate of neurotoxin-producing Clostridium botulinum

Attribute

Value

% of Total

Genome size (bp)

4,106,655

100.00%

DNA coding (bp)

3,416,102

83.18%

DNA G + C (bp)

1,142,131

27.81%

Number of scaffolds

16

 

Total genes

3,832

100.00%

Protein coding genes

3,752

97.91%

RNA genes

80

2.09%

Pseudo genes

8a

 

Genes in internal clusters

2,960

76.77%

Genes with function prediction

2,942

77.51%

Genes assigned to COGs

2,456

64.09%

Genes with Pfam domains

3,139

81.92%

Genes with signal peptides

176

4.59%

Genes with transmembrane helices

1,059

27.64%

CRISPR repeats

0

 
  1. aPseudo genes may also be counted as protein coding or RNA genes, so are not additive under total gene count.