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Table 4 Number of genes associated with the 25 general COG functional categories

From: Complete genome sequence of Salmonella enterica subspecies arizonae str. RKS2983

Code Value % of total a Description
J 168 3.83 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 0 0.00 Transcription
L 216 4.92 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 32 0.73 Cell cycle control, mitosis and meiosis
Y 0 0.00 Nuclear structure
V 44 1.00 Defense mechanisms
T 106 2.41 Signal transduction mechanisms
M 223 5.08 Cell wall/membrane biogenesis
N 89 2.03 Cell motility
Z 0 0.00 Cytoskeleton
W 0 0.00 Extracellular structures
U 44 1.00 Intracellular trafficking and secretion
O 137 3.12 Posttranslational modification, protein turnover, chaperones
C 240 5.47 Energy production and conversion
G 307 6.99 Carbohydrate transport and metabolism
E 314 7.15 Amino acid transport and metabolism
F 76 1.73 Nucleotide transport and metabolism
H 142 3.23 Coenzyme transport and metabolism
I 88 2.00 Lipid transport and metabolism
P 182 4.15 Inorganic ion transport and metabolism
Q 53 1.21 Secondary metabolites biosynthesis, transport and catabolism
R 311 7.08 General function prediction only
S 348 7.93 Function unknown
- 1007 22.94 Not in COGs
  1. a.) The total is based on the total number of protein coding genes in the annotated genome.