Table 4 Number of genes associated with the 25 general COG functional categories
From: Complete genome sequence of Salmonella enterica subspecies arizonae str. RKS2983
Code | Value | % of total a | Description |
|---|---|---|---|
J | 168 | 3.83 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 0 | 0.00 | Transcription |
L | 216 | 4.92 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 32 | 0.73 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 44 | 1.00 | Defense mechanisms |
T | 106 | 2.41 | Signal transduction mechanisms |
M | 223 | 5.08 | Cell wall/membrane biogenesis |
N | 89 | 2.03 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 44 | 1.00 | Intracellular trafficking and secretion |
O | 137 | 3.12 | Posttranslational modification, protein turnover, chaperones |
C | 240 | 5.47 | Energy production and conversion |
G | 307 | 6.99 | Carbohydrate transport and metabolism |
E | 314 | 7.15 | Amino acid transport and metabolism |
F | 76 | 1.73 | Nucleotide transport and metabolism |
H | 142 | 3.23 | Coenzyme transport and metabolism |
I | 88 | 2.00 | Lipid transport and metabolism |
P | 182 | 4.15 | Inorganic ion transport and metabolism |
Q | 53 | 1.21 | Secondary metabolites biosynthesis, transport and catabolism |
R | 311 | 7.08 | General function prediction only |
S | 348 | 7.93 | Function unknown |
- | 1007 | 22.94 | Not in COGs |