Table 3 Genome statistics
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 3,409,949 | 100.00% |
DNA coding (bp) | 3,058,064 | 89.68% |
DNA G + C (bp) | 2,291,117 | 67.19% |
DNA scaffolds | 22 | |
Total genes | 3,092 | 100.00% |
Protein-coding genes | 3,033 | 98.09% |
RNA genes | 59 | 3.26% |
Pseudogenes | 0 | 0% |
Genes in internal clusters | Unknown | |
Genes with function prediction | 2,536 | 82.02% |
Genes assigned to COGs | 2,549 | 82.44% |
Genes assigned Pfam domains | 2,617 | 84.67% |
Genes with signal peptides | 403 | 13.03% |
Genes with transmembrane helices | 675 | 21.83% |
CRISPR repeats | 4 |