Table 5 Genome statistics comparison among baeocytous cyanobacteria
Genome name | Chroococcidiopsis | Pleurocapsa | Stanieria | Xenococcus | Myxosarcina | ||
|---|---|---|---|---|---|---|---|
PCC 7203 | PCC 6712 | PCC 7327 | PCC 7319 | PCC 7437 | PCC 7305 | GI1 | |
Genome size (bp) | 6,689,401 | 5,720,887 | 4,986,817 | 7,386,997 | 5,544,990 | 5,929,641 | 7,069,859 |
G + C content (%) | 44.5 | 35.3 | 45.2 | 38.7 | 36.2 | 39.7 | 40.1 |
Total genes | 6,033 | 5,176 | 4,665 | 5,896 | 5,041 | 5,419 | 6,953 |
Protein-coding genes | 5,752 | 5,116 | 4,268 | 5,762 | 4,781 | 5,373 | 6,891 |
Protein with function prediction | 3,728 | 3,988 | 2,848 | 1,256 | 3,393 | 3,694 | 3,664 |
RNA genes | 58 | 60 | 56 | 52 | 52 | 46 | 62 |
COGs | 3,980 | 3,372 | 2,970 | 3,896 | 3,207 | 3,458 | 4,118 |
%COGs | 65.97% | 65.15% | 63.67% | 66.08% | 63.62% | 63.81% | 59.23% |
Pfam | 4,530 | 3,918 | 3,421 | 4,495 | 3,716 | 4,049 | 4,730 |
%Pfam | 75.09% | 75.70% | 73.33% | 76.24% | 73.72% | 74.72% | 68.03% |
TIGRfam | 3,107 | 2,527 | 2,361 | 2,872 | 2,489 | 2,584 | 3,078 |
%TIGRfam | 51.50% | 48.82% | 50.61% | 48.71% | 49.38% | 47.68% | 44.27% |
SMART | 1,338 | 1,202 | 1,025 | 1,294 | 1,151 | 1,154 | 1,452 |
%SMART | 22.18% | 23.22% | 21.97% | 21.95% | 22.83% | 21.30% | 20.88% |
PRK | 3,211 | 2,603 | 2,484 | 2,968 | 2,549 | 2,629 | 3,154 |
%PRK | 53.22% | 50.29% | 53.25% | 50.34% | 50.57% | 48.51% | 45.36% |