Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | % age a | Description |
|---|---|---|---|
J | 196 | 2.84 | Translation |
A | 0 | 0 | RNA processing and modification |
K | 274 | 3.98 | Transcription |
L | 307 | 4.46 | Replication, recombination and repair |
B | 2 | 0.03 | Chromatin structure and dynamics |
D | 60 | 0.87 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 74 | 1.07 | Defense mechanisms |
T | 396 | 5.75 | Signal transduction mechanisms |
M | 274 | 3.98 | Cell wall/membrane biogenesis |
N | 41 | 0.59 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 80 | 1.16 | Intracellular trafficking and secretion |
O | 193 | 2.80 | Posttranslational modification, protein turnover, chaperones |
C | 239 | 3.47 | Energy production and conversion |
G | 212 | 3.08 | Carbohydrate transport and metabolism |
E | 299 | 4.34 | Amino acid transport and metabolism |
F | 87 | 1.26 | Nucleotide transport and metabolism |
H | 194 | 2.82 | Coenzyme transport and metabolism |
I | 96 | 1.39 | Lipid transport and metabolism |
P | 287 | 4.16 | Inorganic ion transport and metabolism |
Q | 151 | 2.19 | Secondary metabolites biosynthesis, transport and catabolism |
R | 677 | 9.82 | General function prediction only |
S | 401 | 5.82 | Function unknown |
- | 2773 | 40.24 | Not in COGs |