Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,509,395 | 100.00% |
DNA coding (bp) | 2,294,427 | 91.43% |
DNA G + C (bp) | 1,593,935 | 63.52% |
DNA scaffolds | 36 | 100.00% |
Total genes | 2,450 | 100.00% |
Protein coding genes | 2,382 | 97.22% |
RNA genes | 68 | 2.78% |
Pseudo genes | 0 | 0 |
Genes in internal clusters | 1,788 | 72.98% |
Genes with function prediction | 2,095 | 85.51% |
Genes assigned to COGs | 1,829 | 74.65% |
Genes with Pfam domains | 2,129 | 86.90% |
Genes with signal peptides | 171 | 6.98% |
Genes with transmembrane helices | 505 | 20.61% |
CRISPR repeats | 0 | 0 |