Table 4 Number of genes associated with the general COG functional categories
Code | Value | % of total (6,228) | COG category |
|---|---|---|---|
J | 199 | 3.20 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 520 | 8.35 | Transcription |
L | 197 | 3.16 | Replication, recombination and repair |
B | 3 | 0.05 | Chromatin structure and dynamics |
D | 30 | 0.48 | Cell cycle control, cell division, chromosome partitioning |
V | 103 | 1.65 | Defense mechanisms |
T | 248 | 3.98 | Signal transduction mechanisms |
M | 290 | 4.66 | Cell wall/membrane/envelope biogenesis |
N | 72 | 1.16 | Cell motility |
U | 118 | 1.89 | Intracellular trafficking, secretion, and vesicular transport |
O | 200 | 3.21 | Posttranslational modification, protein turnover, chaperones |
C | 432 | 6.94 | Energy production and conversion |
G | 382 | 6.13 | Carbohydrate transport and metabolism |
E | 702 | 11.27 | Amino acid transport and metabolism |
F | 81 | 1.30 | Nucleotide transport and metabolism |
H | 208 | 3.34 | Coenzyme transport and metabolism |
I | 391 | 6.28 | Lipid transport and metabolism |
P | 338 | 5.43 | Inorganic ion transport and metabolism |
Q | 301 | 4.83 | Secondary metabolite biosynthesis, transport and catabolism |
R | 799 | 12.83 | General function prediction only |
S | 614 | 9.86 | Function unknown |
- | 4,341 | 43.77 | Not in COGS |