Table 4 Number of genes associated with the general COG functional categories
Code | Value | % of total (5,458) | COG category |
|---|---|---|---|
J | 184 | 3.37 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 378 | 6.93 | Transcription |
L | 142 | 2.60 | Replication, recombination and repair |
B | 2 | 0.04 | Chromatin structure and dynamics |
D | 29 | 0.53 | Cell cycle control, cell division, chromosome partitioning |
V | 99 | 1.81 | Defense mechanisms |
T | 222 | 4.07 | Signal transduction mechanisms |
M | 256 | 4.69 | Cell wall/membrane/envelope biogenesis |
N | 62 | 1.14 | Cell motility |
U | 105 | 1.92 | Intracellular trafficking, secretion, and vesicular transport |
O | 195 | 3.57 | Posttranslational modification, protein turnover, chaperones |
C | 426 | 7.81 | Energy production and conversion |
G | 343 | 6.28 | Carbohydrate transport and metabolism |
E | 625 | 11.45 | Amino acid transport and metabolism |
F | 82 | 1.50 | Nucleotide transport and metabolism |
H | 204 | 3.74 | Coenzyme transport and metabolism |
I | 346 | 6.34 | Lipid transport and metabolism |
P | 281 | 5.15 | Inorganic ion transport and metabolism |
Q | 245 | 4.49 | Secondary metabolite biosynthesis, transport and catabolism |
R | 711 | 13.03 | General function prediction only |
S | 521 | 9.55 | Function unknown |
- | 3,310 | 40.46 | Not in COGS |