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Table 1 Classification and general features of Bradyrhizobium sp. Tv2a.2 in accordance with the MIGS recommendations [42] published by the Genome Standards Consortium [43]

From: High-quality permanent draft genome sequence of Bradyrhizobium sp. Tv2a.2, a microsymbiont of Tachigali versicolor discovered in Barro Colorado Island of Panama

MIGS ID

Property

Term

Evidence code

 

Classification

Domain Bacteria

TAS [44]

  

Phylum Proteobacteria

TAS [45,46]

  

Class Alphaproteobacteria

TAS [46,47]

  

Order Rhizobiales

TAS [48]

  

Family Bradyrhizobiaceae

TAS [49]

  

Genus Bradyrhizobium

TAS [50]

  

Species Bradyrhizobium sp.

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-sporulating

NAS

 

Temperature range

Unknown

NAS

 

Optimum temperature

28°C

NAS

 

pH range; Optimum

Unknown

 
 

Carbon source

Varied

NAS

 

Energy source

Chemoorganotroph

NAS

MIGS-6

Habitat

Soil, root nodule, host

TAS [10]

MIGS-6.3

Salinity

Non-halophile

NAS

MIGS-22

Oxygen requirement

Aerobic

NAS

MIGS-15

Biotic relationship

Free living, symbiotic

TAS [10]

MIGS-14

Pathogenicity

Non-pathogenic

NAS

 

Biosafety level

1

TAS [51]

 

Isolation

Root nodule of Tachigali versicolor

TAS [10]

MIGS-4

Geographic location

Barro Colorado Island, Panama

TAS [10]

MIGS-5

Sample collection

1997

IDA

MIGS-4.1

Latitude

9.1663

IDA

MIGS-4.2

Longitude

- 79.8248

IDA

MIGS-4.3

Depth

5 cm

IDA

MIGS-4.4

Altitude

28 m

IDA

  1. Evidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [52,53].