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Table 5 Number of genes associated with general COG functional categories

From: Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E

Code

Value

% age

Description

J

198

3.83

Translation, ribosomal structure and biogenesis

A

1

0.02

RNA processing and modification

K

489

9.45

Transcription

L

159

3.07

Replication, recombination and repair

B

1

0.02

Chromatin structure and dynamics

D

43

0.83

Cell cycle control, cell division, chromosomepartitioning

V

71

1.37

Defense mechanisms

T

235

4.54

Signal transduction mechanisms

M

260

5.03

Cell wall/membrane biogenesis

N

62

1.20

Cell motility

U

111

2.15

Intracellular trafficking and secretion

O

158

3.05

Posttranslational modification, protein turnover, chaperones

C

342

6.61

Energy production and conversion

G

583

11.27

Carbohydrate transport and metabolism

E

538

10.40

Amino acid transport and metabolism

F

102

1.97

Nucleotide transport and metabolism

H

215

4.16

Coenzyme transport and metabolism

I

130

2.51

Lipid transport and metabolism

P

344

6.65

Inorganic ion transport and metabolism

Q

112

2.17

Secondary metabolites biosynthesis, transport and catabolism

R

541

10.46

General function prediction only

S

414

8.00

Function unknown

-

774

14.97

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome.