Skip to main content

Advertisement

Table 2 Genome sequencing project information for Klebsiella variicola strain DX120E

From: Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E

MIGS ID Property Term
MIGS-31 Finishing quality Finished
MIGS-28 Libraries used PacBio 4 –10Kb library
Illumina 500 bp library
MIGS-29 Sequencing platforms PacBio RS II
Illumina HiSeq 2000
MIGS-31.2 Fold coverage PacBio 96 ×
Illumina 106 ×
MIGS-30 Assemblers HGAP in smrtanalysis-2.1.1SOAPdenovo 2.04
MIGS-32 Gene calling method GeneMarkS+
  Locus Tag KR75
  Genbank ID CP009274 (Chromosome)
CP009275 (plasmid pKV1)
CP009276 (plasmid pKV2)
  Genbank Date of Release January 1, 2015
  GOLD ID Gi0078577
  BIOPROJECT PRJNA259590
MIGS 13 Source Material Identifier CGMCC 1.14935
  Project relevance Agriculture, plant-microbe interactions