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Table 1 Classification and general features of Klebsiella variicola strain DX120E according to the MIGS recommendations [11]

From: Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E

MIGS ID

Property

Term

Evidence code a

 

Classification

Domain Bacteria

TAS [12]

Phylum Proteobacteria

TAS [13]

Class Gammaproteobacteria

TAS [14,15]

Order Enterobacteriales

TAS [16]

Family Enterobacteriaceae

TAS [17,18]

Genus Klebsiella

TAS [18,19]

Species Klebsiella variicola

TAS [1,20]

Type strain:F2R9T (ATCC BAA-830 = DSM 15968)

TAS [1]

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

Non-motile

IDA

 

Sporulation

Non-sporulating

IDA

 

Temperature range

4–40°C

IDA

 

Optimum temperature

28–32°C

IDA

 

pH range; Optimum

3.5–8.5; 7.0

IDA

Carbon source

Sucrose, citrate, fructose, galactose, glucose, lactose, malate, maltose, mannitol, mannose, rhamnose, & sorbitol

IDA

MIGS-6

Habitat

Soil, plants

IDA

MIGS-6.3

Salinity

0 – 5% NaCl (w/v)

IDA

MIGS-22

Oxygen requirement

Aerobic

IDA

MIGS-15

Biotic relationship

Free-living, endophytic

IDA

MIGS-14

Pathogenicity

Not reported

 

MIGS-4

Geographic location

Daxin, Guangxi, China

TAS [9]

MIGS-5

Sample collection

2008

TAS [9]

MIGS-4.1 MIGS-4.2

Longitude

107°20’E

NAS

Latitude

22°80’N

NAS

MIGS-4.3

Depth

0.1 – 0.2 m below the surface

IDA

MIGS-4.4

Altitude

320 m

NAS

  1. aEvidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [21].