Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 158 | 10.52 | Translation |
A | 0 | 0 | RNA processing and modification |
K | 40 | 2.66 | Transcription |
L | 107 | 7.12 | Replication, recombination and repair |
B | 0 | 0 | Chromatin structure and dynamics |
D | 20 | 1.33 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 17 | 1.13 | Defense mechanisms |
T | 32 | 2.13 | Signal transduction mechanisms |
M | 114 | 7.59 | Cell wall/membrane biogenesis |
N | 2 | 0.13 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 64 | 4.26 | Intracellular trafficking and secretion |
O | 72 | 4.79 | Posttranslational modification, protein turnover and chaperones |
C | 94 | 6.26 | Energy production and conversion |
G | 45 | 3 | Carbohydrate transport and metabolism |
E | 90 | 5.99 | Amino acid transport and metabolism |
F | 20 | 1.33 | Nucleotide transport and metabolism |
H | 40 | 2.66 | Coenzyme transport and metabolism |
I | 29 | 1.93 | Lipid transport and metabolism |
P | 52 | 3.46 | Inorganic ion transport and metabolism |
Q | 14 | 0.93 | Secondary metabolites biosynthesis, transport and catabolism |
R | 146 | 9.72 | General function prediction only |
S | 53 | 3.52 | Function unknown |
X | 440 | 29.29 | Not in COGs |