Table 4 Number of protein coding genes of Mesorhizobium loti R7A associated with the general COG functional categories
From: Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7A
Code | Value | % age | COG category |
|---|---|---|---|
J | 199 | 3.49 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 521 | 9.13 | Transcription |
L | 172 | 3.01 | Replication, recombination and repair |
B | 6 | 0.11 | Chromatin structure and dynamics |
D | 30 | 0.53 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 65 | 1.14 | Defense mechanisms |
T | 217 | 3.80 | Signal transduction mechanisms |
M | 296 | 5.19 | Cell wall/membrane biogenesis |
N | 53 | 0.93 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 1 | 0.02 | Extracellular structures |
U | 124 | 2.17 | Intracellular trafficking and secretion |
O | 195 | 3.42 | Posttranslational modification, protein turnover, chaperones |
C | 304 | 5.33 | Energy production conversion |
G | 511 | 8.95 | Carbohydrate transport and metabolism |
E | 675 | 11.83 | Amino acid transport metabolism |
F | 89 | 1.56 | Nucleotide transport and metabolism |
H | 216 | 3.78 | Coenzyme transport and metabolism |
I | 242 | 4.24 | Lipid transport and metabolism |
P | 249 | 4.36 | Inorganic ion transport and metabolism |
Q | 181 | 3.17 | Secondary metabolite biosynthesis, transport and catabolism |
R | 750 | 13.14 | General function prediction only |
S | 612 | 10.72 | Function unknown |
- | 1,271 | 19.87 | Not in COGS |