Table 5 Number of protein coding genes of Methylobacterium sp. WSM2598 associated with the general COG functional categories
Code | Value | % age | COG category |
|---|---|---|---|
J | 176 | 3.15 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.05 | RNA processing and modification |
K | 398 | 7.13 | Transcription |
L | 384 | 6.88 | Replication, recombination and repair |
B | 5 | 0.09 | Chromatin structure and dynamics |
D | 44 | 0.79 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 78 | 1.40 | Defense mechanisms |
T | 422 | 7.56 | Signal transduction mechanisms |
M | 306 | 5.48 | Cell wall/membrane biogenesis |
N | 139 | 2.49 | Cell motility |
Z | 2 | 0.04 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 96 | 1.72 | Intracellular trafficking and secretion |
O | 155 | 2.78 | Posttranslational modification, protein turnover, chaperones |
C | 399 | 7.15 | Energy production conversion |
G | 307 | 5.50 | Carbohydrate transport and metabolism |
E | 526 | 9.42 | Amino acid transport metabolism |
F | 80 | 1.43 | Nucleotide transport and metabolism |
H | 208 | 3.73 | Coenzyme transport and metabolism |
I | 234 | 4.19 | Lipid transport and metabolism |
P | 285 | 5.11 | Inorganic ion transport and metabolism |
Q | 174 | 3.12 | Secondary metabolite biosynthesis, transport and catabolism |
R | 640 | 11.47 | General function prediction only |
S | 520 | 9.32 | Function unknown |
- | 2,324 | 31.62 | Not in COGS |