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Table 1 Classification and general features of Methylobacterium sp. strain WSM2598 according to the MIGS recommendations [17, 18]

From: Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [18]

Phylum Proteobacteria

TAS [19]

Class Alphaproteobacteria

TAS [20, 21]

Order Rhizobiales

TAS [21, 22]

Family Methylobacteriaceae

TAS [21, 23]

Genus Methylobacterium

TAS [2426]

Species Methylobacterium sp.

TAS [10]

Strain WSM2598

TAS [10]

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-sporulating

NAS

 

Temperature range

Mesophile

IDA

 

Optimum temperature

28°C

NAS

 

Salinity

Non-halophile

NAS

MIGS-22

Oxygen requirement

Aerobic

IDA

 

Carbon source

Formate, succinate & glutamate

TAS [14]

 

Energy source

Chemoorganotroph

TAS [14]

MIGS-6

Habitat

Soil, root nodule on host

TAS [10]

MIGS-15

Biotic relationship

Free living, symbiotic

TAS [10]

MIGS-14

Pathogenicity

Non-pathogenic

NAS

 

Biosafety level

1

TAS [27]

 

Isolation

Root nodule of Listia bainesii

TAS [10]

MIGS-4

Geographic location

Estcourt Research Station, South Africa

TAS [10]

MIGS-5

Sample collection date

May 27, 2002

TAS [10]

MIGS-4.1

Latitude

−29.9125

TAS [10]

MIGS-4.2

Longitude

29.16667

TAS [10]

MIGS-4.3

Depth

Not reported

NAS

MIGS-4.4

Altitude

1,200 m

IDA

  1. Evidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [31].