Table 4 Number of protein coding genes of Ensifer medicae Di28 associated with the general COG functional categories
Code | Gene count | % age | Description |
|---|---|---|---|
J | 188 | 3.34 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 491 | 8.73 | Transcription |
L | 222 | 3.95 | Replication, recombination and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 40 | 0.71 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 61 | 1.08 | Defense mechanisms |
T | 226 | 4.02 | Signal transduction mechanisms |
M | 279 | 4.96 | Cell wall/membrane biogenesis |
N | 68 | 1.21 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 1 | 0.02 | Extracellular structures |
U | 104 | 1.85 | Intracellular trafficking and secretion |
O | 178 | 3.16 | Posttranslational modification, protein turnover, chaperones |
C | 339 | 6.03 | Energy production conversion |
G | 594 | 10.56 | Carbohydrate transport and metabolism |
E | 630 | 11.20 | Amino acid transport metabolism |
F | 109 | 1.94 | Nucleotide transport and metabolism |
H | 192 | 3.41 | Coenzyme transport and metabolism |
I | 212 | 3.77 | Lipid transport and metabolism |
P | 286 | 5.08 | Inorganic ion transport and metabolism |
Q | 160 | 2.84 | Secondary metabolite biosynthesis, transport and catabolism |
R | 690 | 12.26 | General function prediction only |
S | 555 | 9.86 | Function unknown |
- | 1417 | 21.90 | Not in COGS |