Table 5 Number of genes associated with the 25 general COG functional categories
Code | Value | % of total | Description |
|---|---|---|---|
J | 164 | 5.14 | Translation |
A | 1 | 0.03 | RNA processing and modification |
K | 230 | 7.21 | Transcription |
L | 188 | 5.89 | Replication, recombination and repair |
B | 4 | 0.13 | Chromatin structure and dynamics |
D | 32 | 1.00 | Cell cycle control, mitosis and meiosis |
Y | - | - | Nuclear structure |
V | 33 | 1.03 | Defense mechanisms |
T | 127 | 3.98 | Signal transduction mechanisms |
M | 182 | 5.71 | Cell wall/membrane biogenesis |
N | 64 | 2.01 | Cell motility |
Z | - | - | Cytoskeleton |
W | - | - | Extracellular structures |
U | 62 | 1.94 | Intracellular trafficking and secretion |
O | 109 | 3.42 | Posttranslational modification, protein turnover, chaperones |
C | 215 | 6.74 | Energy production and conversion |
G | 216 | 6.77 | Carbohydrate transport and metabolism |
E | 325 | 10.19 | Amino acid transport and metabolism |
F | 76 | 2.38 | Nucleotide transport and metabolism |
H | 145 | 4.55 | Coenzyme transport and metabolism |
I | 118 | 3.70 | Lipid transport and metabolism |
P | 171 | 5.36 | Inorganic ion transport and metabolism |
Q | 108 | 3.39 | Secondary metabolites biosynthesis, transport and catabolism |
R | 391 | 12.26 | General function prediction only |
S | 229 | 7.18 | Function unknown |
- | 628 | 18.51 | Not in COGs |