Skip to main content

Table 4 Nucleotide content and gene count levels of the genome

From: High quality draft genome sequence of the heavy metal resistant bacterium Halomonas zincidurans type strain B6T

Attribute

 

Genome (total)

 

Value

% of total

Genome size (bp)

3,554,760

-

DNA coding (bp)

3,153,982

88.73

DNA G+C (bp)

2,289,453

66.41

DNA scaffolds

2

-

Total genes

3,392

-

Protein coding genes

3,325

98.02

RNA genes

67

1.98

Genes with function prediction

2,916

85.97

Genes assigned to COGs

2,764

81.49

1 or more conserved domains

2,764

81.49

2 or more conserved domains

329

9.70

3 or more conserved domains

74

2.18

4 or more conserved domains

23

0.68

Genes with Pfam domains

2,188

64.50

Genes with signal peptides

180

5.31

Genes with transmembrane helices

697

20.55

CRISPR repeats

1

-