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Table 4 Number of genes associated with general COG functional categories

From: Complete genome sequence of the lignin-degrading bacterium Klebsiella sp. strain BRL6-2

Code

Value

% of total a

Description

J

204

3.92

Translation

A

2

0.04

RNA processing and modification

K

489

9.39

Transcription

L

167

3.21

Replication, recombination and repair

B

0

0

Chromatin structure and dynamics

D

38

0.73

Cell cycle control, mitosis and meiosis

V

61

1.17

Defense mechanisms

T

213

4.09

Signal transduction mechanisms

M

261

5.01

Cell wall/membrane biogenesis

N

128

2.46

Cell motility

U

178

3.42

Intracellular trafficking and secretion

O

149

2.86

Post-translational modification, protein turnover, chaperones

C

306

5.88

Energy production and conversion

G

644

12.37

Carbohydrate transport and metabolism

E

508

9.76

Amino acid transport and metabolism

F

113

2.17

Nucleotide transport and metabolism

H

207

3.98

Coenzyme transport and metabolism

I

133

2.55

Lipid transport and metabolism

P

329

6.32

Inorganic ion transport and metabolism

Q

138

2.65

Secondary metabolites biosynthesis, transport and catabolism

R

533

10.24

General function prediction only

S

405

7.78

Function unknown

-

896

16.31

Not in COGs

  1. a) The total is based on the total number of protein coding genes in the annotated genome.