Skip to main content

Table 7 MaSH values calculated for the ML trees inferred in this study

From: Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae

Subtree

16S rRNA gene

Full supermatrix

MARE supermatrix

Core-gene supermatrix

Gene content

Ortholog content

S. acidiphila, S. rosea*

0.027

~

~

~

~

~

B. cremea*, B. marina

0.032

~

~

~

~

~

P. brasiliensis, P. maris

0.072

0.414

0.272

0.287

0.166

0.185

P. limnophilus, Sc.

0.074

0.382

0.240

0.245

0.193

0.215

Te.*, Za.

0.086

~

~

~

~

~

Aq.*, Is.

0.090

~

~

~

~

~

Aq.*, Is., S. acidiphila, S. rosea*

0.100

0.422

0.305

0.309

0.177

0.209

B. cremea*, B. marina, Pi.

0.101

0.378

0.272

0.267

0.164

0.171

Ge., Te.*, Za.

0.119

0.346

0.280

0.275

0.213

0.236

Pl., Sc.

0.121

0.480

0.338

0.333

0.198

0.220

B. cremea*, B. marina, Pi., Rh.

0.125

0.539

0.353

0.382

0.379

0.347

Aq.*, Ge., Is., S. acidiphila, S. rosea*, Te.*, Za.

0.245

0.633

0.579

0.522

0.381

0.448

Aq.*, Ge., Is., Pl., Sc., S. acidiphila, S. rosea*, Te.*, Za.

0.297

0.658

0.523

0.522

0.410

0.382

Aq.*, B. cremea*, B. marina, Ge., Is., Pi., Pl., Rh., Sc., S. acidiphila, S. rosea*, Te.*, Za.

0.308

0.734

0.682

0.588

0.427

0.495

Aq.*, B. cremea*, B. marina, Ge., Is., Ph., Pi., Pl., Rh., Sc., S. acidiphila, S. rosea*, Te.*, Za.

0.639

1.258

1.118

1.082

0.558

0.649

  1. *Indicate organisms that were only present in the 16S rRNA gene tree.