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Table 4 Number of genes associated with the general COG functional categories

From: Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae

Code

Value

% age

    Description

J

149

4.0

   Translation, ribosomal structure and biogenesis

A

3

0.0

   RNA processing and modification

K

216

5.7

   Transcription

L

223

5.9

   Replication, recombination and repair

B

4

0.1

   Chromatin structure and dynamics

D

32

0.9

   Cell cycle control, cell division, chromosome partitioning

Y

0

0.0

   Nuclear structure

V

83

2.2

   Defense mechanisms

T

213

5.7

   Signal transduction mechanisms

M

237

6.3

   Cell wall/membrane/envelope biogenesis

N

193

5.1

   Cell motility

Z

0

0.0

   Cytoskeleton

W

0

0.0

   Extracellular structures

U

250

6.7

   Intracellular trafficking, secretion, and vesicular transport

O

140

3.7

   Posttranslational modification, protein turnover, chaperones

C

166

4.4

   Energy production and conversion

G

190

5.1

   Carbohydrate transport and metabolism

E

208

5.6

   Amino acid transport and metabolism

F

61

1.6

   Nucleotide transport and metabolism

H

131

3.5

   Coenzyme transport and metabolism

I

98

2.6

   Lipid transport and metabolism

P

258

6.9

   Inorganic ion transport and metabolism

Q

68

1.8

   Secondary metabolites biosynthesis, transport and catabolism

R

461

12.3

   General function prediction only

S

356

9.5

   Function unknown

-

1,645

33.8

   Not in COGs