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Figure 1 | Standards in Genomic Sciences

Figure 1

From: Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae

Figure 1

Phylogenetic tree highlighting the position of P. brasiliensis relative to the other species within the family Planctomycetaceae . The tree was inferred from 1,343 aligned characters of the 16S rRNA gene sequence under the maximum likelihood (ML) criterion as previously described [15]. Rooting was done initially using the midpoint method [17] and then checked for its agreement with the current classification (Table 1). The branches are scaled in terms of the expected number of substitutions per site. Numbers above the branches are support values from 400 ML bootstrap replicates (left) and from 1,000 Maximum-Parsimony bootstrap replicates (right) if larger than 60% [15]. Lineages with type strain genome sequencing projects registered in GOLD [18] as unpublished are marked with one star, those listed as published (as well as the target organism) with two stars [19–22].

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