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Table 1 Classification and general features of Pontibacter roseus SRC-1T according to the MIGS recommendations [4], published by the Genomic Standards Consortium [5]

From: High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India

MIGS ID

Property

Term

Evidence code

  

Domain Bacteria

TAS [6]

  

Phylum Bacteroidetes

TAS [7, 8]

  

Class Cytophagia

TAS [8, 9]

 

Current classification

Order Cytophagales

TAS [10, 11]

  

Family Cytophagaceae

TAS [10, 12]

  

Genus Pontibacter

TAS [2, 3, 10]

  

Species Pontibacter roseus

TAS [2, 3, 10]

 

Strain

SRC-1T

TAS [2, 3, 10]

 

Gram stain

Gram-negative

TAS [2]

 

Cell shape

Irregular rods

TAS [2]

 

Motility

Non-motile

TAS [2]

 

Sporulation

Non-sporulating

TAS [2]

 

Temperature range

4–37°C

TAS [2]

 

Optimum temperature

30°C

TAS [2]

 

Salinity

Halotolerant

TAS [2]

 

Relationship to oxygen

Obligate aerobe

TAS [2]

 

Carbon source

Sugars (Glucose, Galactose etc.)

TAS [2]

   

TAS [2]

MIGS-6

Habitat

Wastewater, aquatic

TAS [2]

MIGS-6.2

pH

pH 6.0–10.0

TAS [2]

MIGS-15

Biotic relationship

Free living

NAS

MIGS-14

Known pathogenicity

Not reported

 
 

Biosafety level

1

NAS

MIGS-23

Isolation

Muddy water

TAS [2]

MIGS-4

Geographic location

Chandigarh, India

TAS [2]

MIGS-5

Time of sample collection

Before 2006

TAS [2]

MIGS-4.1

Latitude

30.733

TAS [2]

MIGS-4.2

Longitude

76.779

TAS [2]

  1. Evidence codes – TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence); Evidence codes are from the Gene Ontology project [13].