Table 4 Number of genes associated with the general COG functional categories*
Code | value | % age | Description |
|---|---|---|---|
J | 166 | 4.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 262 | 7.2 | Transcription |
L | 146 | 4.0 | Replication, recombination and repair |
B | 4 | 0.1 | Chromatin structure and dynamics |
D | 35 | 1.0 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 49 | 1.3 | Defense mechanisms |
T | 149 | 4.1 | Signal transduction mechanisms |
M | 189 | 5.2 | Cell wall/membrane/envelope biogenesis |
N | 87 | 2.4 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 102 | 2.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 161 | 4.4 | Posttranslational modification, protein turnover, chaperones |
C | 253 | 6.9 | Energy production and conversion |
G | 147 | 4.0 | Carbohydrate transport and metabolism |
E | 442 | 12.1 | Amino acid transport and metabolism |
F | 70 | 1.9 | Nucleotide transport and metabolism |
H | 173 | 4.7 | Coenzyme transport and metabolism |
I | 146 | 4.0 | Lipid transport and metabolism |
P | 177 | 4.8 | Inorganic ion transport and metabolism |
Q | 126 | 3.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 431 | 11.8 | General function prediction only |
S | 339 | 9.3 | Function unknown |
- | 932 | 21.9 | Not in COGs |