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Table 5 Number of genes associated with the 25 general COG functional categories

From: Draft genome sequences for the obligate bacterial predators Bacteriovorax spp. of four phylogenetic clusters

Code BSW11_IV SEQ25_V DB6_IX BAL6_X  
Value % of total a Value % of total Value % of total Value % of total Description
J 166 4.80 167 5.07 137 4.29 163 5.31 Translation
A 0 0.00 0 0.00 0 0.00 0 0.00 RNA processing and modification
K 126 3.64 121 3.67 109 3.41 108 3.52 Transcription
L 115 3.32 103 3.12 100 3.13 112 3.65 Replication and repair
B 1 0.03 1 0.03 2 0.06 1 0.03 Chromatin structure and dynamics
D 24 0.69 27 0.82 23 0.72 29 0.94 Cell cycle control and mitosis
Y 0 0.00 0 0.00 0 0.00 0 0.00 Nuclear structure
V 45 1.3 34 1.03 31 0.97 40 1.30 Defense mechanisms
T 229 6.62 205 6.22 219 6.86 126 4.11 Signal transduction mechanisms
M 155 4.48 161 4.89 129 4.04 140 4.56 Cell wall/membrane/biogenesis
N 95 2.74 82 2.49 68 2.13 71 2.31 Cell motility
Z 2 0.06 3 0.09 2 0.06 3 0.10 Cytoskeleton
W 21 0.61 22 0.67 16 0.50 19 0.62 Extracellular structures
U 43 1.42 43 1.31 38 1.19 44 1.43 Intracellular trafficking and secretion
O 125 3.61 118 3.58 97 3.03 118 3.84 Posttranslational modification, protein turnover, chaperones
C 117 3.38 123 3.73 106 3.32 112 3.65 Energy production and conversion
G 72 2.08 80 2.43 67 2.09 53 1.72 Carbohydrate transport and metabolism
E 192 5.55 166 5.04 166 5.20 138 4.50 Amino Acid transport and metabolism
F 53 1.53s 51 1.54 65 2.03 49 1.59 Nucleotide transport and metabolism
H 76 2.19 83 2.52 72 2.25 73 2.38 Coenzyme transport and metabolism
I 108 3.12 91 2.76 104 3.25 96 3.13 Lipid transport and metabolism
P 90 2.60 84 2.55 88 2.75 87 2.83 Inorganic ion transport and metabolism
Q 54 1.56 60 1.82 69 2.16 48 1.56 Secondary metabolites biosynthesis, transport and catabolism
R 308 8.90 296 8.99 274 8.58 262 8.54 General Functional Prediction only
S 156 4.51 150 4.55 124 3.88 142 4.63 Function Unknown
- 1372 39.68 1293 39.27 1355 42.44 1244 40.58 Not in COG
  1. aThe total is based on the total number of protein coding genes in the annotated genome.
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