Table 5 Number of genes associated with the 25 general COG functional categories

J

166

4.80

167

5.07

137

4.29

163

5.31

Translation

A

0

0.00

0

0.00

0

0.00

0

0.00

RNA processing and modification

K

126

3.64

121

3.67

109

3.41

108

3.52

Transcription

L

115

3.32

103

3.12

100

3.13

112

3.65

Replication and repair

B

1

0.03

1

0.03

2

0.06

1

0.03

Chromatin structure and dynamics

D

24

0.69

27

0.82

23

0.72

29

0.94

Cell cycle control and mitosis

Y

0

0.00

0

0.00

0

0.00

0

0.00

Nuclear structure

V

45

1.3

34

1.03

31

0.97

40

1.30

Defense mechanisms

T

229

6.62

205

6.22

219

6.86

126

4.11

Signal transduction mechanisms

M

155

4.48

161

4.89

129

4.04

140

4.56

Cell wall/membrane/biogenesis

N

95

2.74

82

2.49

68

2.13

71

2.31

Cell motility

Z

2

0.06

3

0.09

2

0.06

3

0.10

Cytoskeleton

W

21

0.61

22

0.67

16

0.50

19

0.62

Extracellular structures

U

43

1.42

43

1.31

38

1.19

44

1.43

Intracellular trafficking and secretion

O

125

3.61

118

3.58

97

3.03

118

3.84

Posttranslational modification, protein turnover, chaperones

C

117

3.38

123

3.73

106

3.32

112

3.65

Energy production and conversion

G

72

2.08

80

2.43

67

2.09

53

1.72

Carbohydrate transport and metabolism

E

192

5.55

166

5.04

166

5.20

138

4.50

Amino Acid transport and metabolism

F

53

1.53s

51

1.54

65

2.03

49

1.59

Nucleotide transport and metabolism

H

76

2.19

83

2.52

72

2.25

73

2.38

Coenzyme transport and metabolism

I

108

3.12

91

2.76

104

3.25

96

3.13

Lipid transport and metabolism

P

90

2.60

84

2.55

88

2.75

87

2.83

Inorganic ion transport and metabolism

Q

54

1.56

60

1.82

69

2.16

48

1.56

Secondary metabolites biosynthesis, transport and catabolism

R

308

8.90

296

8.99

274

8.58

262

8.54

General Functional Prediction only

S

156

4.51

150

4.55

124

3.88

142

4.63

Function Unknown

-

1372

39.68

1293

39.27

1355

42.44

1244

40.58

Not in COG