Table 4 Number of genes associated with general COG functional categories
Code | Value | % of total a | Description |
|---|---|---|---|
J | 200 | 3.59 | Translation |
A | 1 | 0.02 | RNA processing and modification |
K | 501 | 9 | Transcription |
L | 156 | 2.8 | Replication, recombination and repair |
B | 5 | 0.09 | Chromatin structure and dynamics |
D | 41 | 0.74 | Cell cycle control, mitosis and meiosis |
Y | - | - | Nuclear structure |
V | 67 | 1.2 | Defense mechanisms |
T | 366 | 6.57 | Signal transduction mechanisms |
M | 267 | 4.8 | Cell wall/membrane biogenesis |
N | 162 | 2.9 | Cell motility |
Z | - | - | Cytoskeleton |
W | - | - | Extracellular structures |
U | 153 | 2.75 | Intracellular trafficking and secretion |
O | 177 | 3.18 | Posttranslational modification, protein turnover, chaperones |
C | 280 | 5.03 | Energy production and conversion |
G | 307 | 5.51 | Carbohydrate transport and metabolism |
E | 554 | 9.95 | Amino acid transport and metabolism |
F | 96 | 1.72 | Nucleotide transport and metabolism |
H | 196 | 3.52 | Coenzyme transport and metabolism |
I | 219 | 3.93 | Lipid transport and metabolism |
P | 301 | 5.41 | Inorganic ion transport and metabolism |
Q | 151 | 2.71 | Secondary metabolites biosynthesis, transport and catabolism |
R | 592 | 10.63 | General function prediction only |
S | 446 | 8.01 | Function unknown |
- | 986 | 17.7 | Not in COGs |