Table 3 Genome statistics
Attribute | Genome (total) | |
|---|---|---|
Value | % of total | |
Genome size (bp) | 6,136,735 | 100 |
DNA coding region (bp) | 5,439,499 | 88.6 |
DNA G+C content (bp) | 3,706,588 | 60.4 |
DNA scaffolds | 1 | - |
Total genes | 5,655 | 100 |
Protein-coding genes | 5,567 | 98.4 |
RNA genes | 88 | 1.6 |
Pseudo genes | 30 | 0.8 |
Genes in internal clusters | NA | - |
Protein-coding genes with function prediction | 4,573 | 82.1 |
Protein-coding genes assigned to COGs | 4,581 | 82.3 |
Proteins with signal peptides | 644 | 11.6 |
Proteins with transmembrane helices | 1,319 | 23.7 |
CRISPR repeats | NA | - |